STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036530Olfactory receptor. (313 aa)    
Predicted Functional Partners:
LOC113021443
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.534
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.488
ENSACLP00000020432
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.465
LOC113022298
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.465
LOC113013015
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.465
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.465
LOC113031132
Arrestin 3a, retinal (X-arrestin).
    
  0.456
SAG
S-antigen visual arrestin.
    
  0.456
LOC113036714
Arrestin, beta 1.
    
  0.456
ENSACLP00000034575
S-antigen; retina and pineal gland (arrestin) a.
    
  0.456
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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