STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc45Leucine rich repeat containing 45. (674 aa)    
Predicted Functional Partners:
LOC113026241
Par-6 family cell polarity regulator alpha.
     
 0.824
LOC113022989
Cell division cycle 42.
 
   
  0.815
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
    0.813
PAK2
Non-specific serine/threonine protein kinase.
 
  
  0.760
pak2
Non-specific serine/threonine protein kinase.
 
  
  0.760
pak1
Non-specific serine/threonine protein kinase.
 
  
  0.760
PAK3
Non-specific serine/threonine protein kinase.
 
  
  0.760
abl1
Tyrosine-protein kinase.
    
  0.703
abl2
Tyrosine-protein kinase.
    
  0.703
kxd1
KxDL motif containing 1.
    
  0.694
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.