Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc45Leucine rich repeat containing 45. (674 aa)    
Predicted Functional Partners:
kxd1
KxDL motif containing 1.
    
  0.957
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
   0.772
sclt1
Sodium channel and clathrin linker 1.
    
 
 0.765
cep83
Centrosomal protein 83.
    
 0.749
fbf1
Uncharacterized protein.
   
  
 0.735
cep89
Centrosomal protein 89.
     
 0.724
wdr37
WD repeat domain 37.
    
 
 0.718
nedd1
NEDD1 gamma-tubulin ring complex targeting factor.
     
 0.714
armc8
Armadillo repeat containing 8.
      
 0.704
c2cd3
C2 domain containing 3 centriole elongation regulator.
     
 0.677
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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