Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113024433Family with sequence similarity 83 member G. (847 aa)    
Predicted Functional Partners:
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
   0.632
gak
Cyclin G associated kinase.
    
   0.626
LOC113022890
Family with sequence similarity 83 member D.
     
 0.538
LOC113034822
Heparin-binding EGF-like growth factor a.
     
  0.484
LOC113033702
EGF-like domain-containing protein.
     
  0.451
LOC113034337
EGF-like domain-containing protein.
     
  0.450
LOC113025599
Betacellulin, epidermal growth factor family member.
     
  0.436
LOC113014999
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
      
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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