STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gria1Glutamate receptor, ionotropic, AMPA 1a. (919 aa)    
Predicted Functional Partners:
gria2
Glutamate receptor, ionotropic, AMPA 2b.
  
0.880
LOC113024706
Uncharacterized protein.
  
0.880
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.831
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
    
 0.827
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
    
 0.824
cnih3
Cornichon family AMPA receptor auxiliary protein 3.
    
 0.824
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.819
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.819
pick1
Protein interacting with prkca 1.
    
 0.810
grip1
Glutamate receptor interacting protein 1.
   
 0.770
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (32%) [HD]