Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001136Von Willebrand factor A domain containing 5B2. (1060 aa)    
Predicted Functional Partners:
rfc4
Replication factor C (activator 1) 4.
   
 0.846
rfc5
Replication factor C (activator 1) 5.
   
  0.841
rfc2
Replication factor C (activator 1) 2.
   
  0.833
xrcc5
X-ray repair complementing defective repair in Chinese hamster cells 5.
   
 
 0.820
rfc3
Replication factor C (activator 1) 3.
   
 0.819
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.811
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 
 0.810
LOC113028304
Uncharacterized protein.
    
 0.792
parg
Poly (ADP-ribose) glycohydrolase a.
    
 0.792
LOC113025253
Poly (ADP-ribose) glycohydrolase, like.
    
 0.792
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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