Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001140Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
ENSACLP00000023599
Geminin DNA replication inhibitor.
    
   0.947
rsph14
Uncharacterized protein.
   
  
 0.750
phf13
PHD finger protein 13.
    
 0.729
cfap161
Cilia and flagella associated protein 161.
   
  
 0.729
ENSACLP00000040478
DLEC1 cilia and flagella associated protein.
    
 
 0.725
lrrc34
Leucine rich repeat containing 34.
      
 0.708
ccdc96
Coiled-coil domain containing 96.
    
 
 0.692
ENSACLP00000023894
Spermatogenesis associated 18.
   
  
 0.684
ccdc13
Coiled-coil domain containing 13.
    
 
 0.684
slmap
Sarcolemma associated protein a.
    
 0.682
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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