STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001140Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.857
ENSACLP00000023599
Geminin DNA replication inhibitor.
    
   0.676
cfap52
Cilia and flagella associated protein 52.
   
 0.606
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.595
ENSACLP00000040478
DLEC1 cilia and flagella associated protein.
    
 0.585
cfap161
Cilia and flagella associated protein 161.
   
  
 0.573
rsph14
Uncharacterized protein.
      
 0.537
lrrc34
Leucine rich repeat containing 34.
      
 0.534
ENSACLP00000023894
Spermatogenesis associated 18.
      
 0.534
cfap74
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
      
 0.516
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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