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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
trub1TruB pseudouridine (psi) synthase family member 1. (278 aa)    
Predicted Functional Partners:
nhp2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.992
gar1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.988
ENSACLP00000036883
NOP58 ribonucleoprotein homolog (yeast).
  
 
 0.988
nop56
NOP56 ribonucleoprotein homolog.
   
 
 0.987
ENSACLP00000007708
Fibrillarin.
   
 
 0.979
pus1
Pseudouridine synthase 1.
  
 0.977
nop10
NOP10 ribonucleoprotein homolog (yeast).
   
 0.976
shq1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
 0.968
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.966
ENSACLP00000038536
Nucleolar and coiled-body phosphoprotein 1.
   
 
 0.966
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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