STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034187Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (103 aa)    
Predicted Functional Partners:
LOC113018906
Chemokine (C-X-C motif) ligand 19.
    
0.967
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
     
 0.885
ENSACLP00000032194
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
     
 0.839
ENSACLP00000011049
Uncharacterized protein.
     
 0.809
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
     
 0.697
CXCL8
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
  
  
 
0.683
CXCL8-2
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
  
  
 
0.683
LOC113034559
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.630
LOC113023884
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.630
LOC113034398
SCY domain-containing protein.
   
 0.627
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.