STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034187Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (103 aa)    
Predicted Functional Partners:
LOC113018906
Chemokine (C-X-C motif) ligand 19.
    
 0.943
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
     
 0.914
LOC113032190
Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.857
LOC113032481
C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
     
 0.820
CXCR3
C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
     
 0.820
ENSACLP00000039180
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.820
ENSACLP00000032194
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
     
 0.804
LOC113032267
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
  0.787
LOC113032270
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
  0.787
LOC113032269
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
  0.787
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.