Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hhexHomeobox domain-containing protein. (289 aa)    
Predicted Functional Partners:
LOC113030736
Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family.
    
   0.780
LOC113011853
Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family.
    
   0.780
ENSACLP00000020154
Zinc finger protein 366.
   
 0.753
LOC113035125
Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family.
    
   0.732
cdkal1
CDK5 regulatory subunit associated protein 1-like 1.
      
 0.726
LOC113011066
GLIS family zinc finger 1a.
    
 0.720
ENSACLP00000021610
GLIS family zinc finger 3.
    
 0.720
LOC113016231
GLIS family zinc finger 1b.
    
 0.720
LOC113036861
Forkhead box A3.
   
 
 0.713
irx3
Iroquois homeobox 3a.
    
 
 0.698
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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