Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fgl2Fibrinogen-like 2a. (495 aa)    
Predicted Functional Partners:
CST7
Cystatin F.
   
  
 0.667
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.634
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.634
mst1r
Macrophage stimulating 1 receptor b.
    
  0.634
mcrs1
Microspherule protein 1.
    
  0.562
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.555
tie1
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
   
 0.545
angptl4
Angiopoietin-like 4.
     
  0.528
ENSACLP00000002322
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  0.501
ENSACLP00000013150
Colony stimulating factor 1 receptor, a; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  0.501
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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