STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brat1BRCA1-associated ATM activator 1. (912 aa)    
Predicted Functional Partners:
e4f1
E4F transcription factor 1.
   
    0.788
ENSACLP00000013582
Uncharacterized protein.
    
 
 0.725
ENSACLP00000035592
BRCA1 associated protein.
      
 0.491
telo2
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
   
    0.465
LOC113008023
BRCA1 associated RING domain 1.
    
 
 0.462
ENSACLP00000008921
BRCT domain-containing protein.
    
 
 0.457
tonsl
Tonsoku-like, DNA repair protein.
      
 0.455
mcm10
Minichromosome maintenance 10 replication initiation factor.
  
   
 0.428
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.