Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113009396Leucine rich repeat containing 17. (452 aa)    
Predicted Functional Partners:
LOC113006695
DIRAS family GTPase 1.
    
 0.760
LOC113012107
DIRAS family, GTP-binding RAS-like 1b.
    
 0.760
creb3l1
BZIP domain-containing protein.
      
 0.746
ENSACLP00000032945
Actin binding LIM protein 1a.
      
 0.724
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.714
ccdc69
Uncharacterized protein.
      
 0.629
habp2
Uncharacterized protein.
    
 0.614
eef1aknmt
Methyltransferase like 13.
      
 0.607
RAP2A
RAP2A, member of RAS oncogene family.
    
 0.597
LOC113007449
RAP2C, member of RAS oncogene family.
    
 0.597
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.