STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001200Hook microtubule-tethering protein 2. (704 aa)    
Predicted Functional Partners:
aktip
Akt interacting protein.
    
 
 0.965
LOC113030206
Malate synthase-like.
   
 
 0.863
fam160a2
Family with sequence similarity 160 member A2.
    
 
 0.847
fam160a1
Family with sequence similarity 160 member A1a.
    
 
 0.847
LOC113017530
Uncharacterized protein.
    
 
 0.847
ENSACLP00000016769
Hook microtubule-tethering protein 1.
    
   0.776
HOOK3
Hook microtubule tethering protein 3.
    
   0.776
ENSACLP00000015298
NBR1 autophagy cargo receptor b.
    
 0.747
LOC113028111
NBR1 autophagy cargo receptor a.
    
 0.747
vps18
VPS18 core subunit of CORVET and HOPS complexes.
    
 
 0.731
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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