STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001211Thymosin beta 2. (56 aa)    
Predicted Functional Partners:
LOC113024469
Uncharacterized protein.
   
 0.844
ENSACLP00000004406
Uncharacterized protein; Belongs to the actin family.
   
 0.844
LOC113024470
Uncharacterized protein.
   
 0.844
LOC113034393
Uncharacterized protein.
   
 0.844
actb
Uncharacterized protein.
   
 0.844
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
   
    0.750
LOC113012684
Actin alpha 1, skeletal muscle.
   
 0.729
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.729
ACTC1
Zgc:86709.
   
 0.729
acta2
Actin alpha 2, smooth muscle.
   
 0.729
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.