STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113015002Nuclear factor, erythroid 2-like 3. (646 aa)    
Predicted Functional Partners:
MAFG
MAF bZIP transcription factor G.
    
 0.885
LOC113020710
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga.
    
 0.885
mafk
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K.
    
 0.849
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
   
 0.783
ddit3
DNA-damage-inducible transcript 3.
   
 0.779
park7
Parkinson protein 7.
     
 0.739
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.732
LOC113036190
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.720
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.720
LOC113012001
Kelch-like ECH-associated protein 1a.
    
 0.717
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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