STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014873Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (192 aa)    
Predicted Functional Partners:
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.889
l3mbtl2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.880
LOC113032446
Chromobox homolog 3b.
     
  0.871
pcgf6
Polycomb group ring finger 6.
    
 0.859
ENSACLP00000022251
Histone H3; Belongs to the histone H3 family.
    
 0.845
emsy
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.832
ENSACLP00000027974
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.828
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.827
LOC113033615
Histone H2A; Belongs to the histone H2A family.
   
 0.827
LOC113027786
Mbt domain containing 1.
    
 0.818
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.