Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001296GBD/FH3 domain-containing protein. (201 aa)    
Predicted Functional Partners:
SPOP
Speckle type BTB/POZ protein.
    
 
 0.812
spopl
Speckle type BTB/POZ protein like b.
    
 
 0.812
LOC113020347
Speckle type BTB/POZ protein.
    
 
 0.812
diaph2
Diaphanous-related formin 2.
     
 0.690
DIAPH1
Diaphanous related formin 1.
     
 0.690
ENSACLP00000034866
Diaphanous-related formin 3.
     
 0.690
FMN1
Formin 1.
    
 0.682
ENSACLP00000003344
Uncharacterized protein.
    
 0.682
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.680
ENSACLP00000019736
NPHS2 stomatin family member, podocin.
    
 
 0.672
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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