Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
syce3Zgc:194246. (97 aa)    
Predicted Functional Partners:
syce2
Uncharacterized protein.
    
 0.985
ENSACLP00000025040
Uncharacterized protein.
    
 0.982
sycp3
Synaptonemal complex protein 3.
    
 0.925
PRDM6
PR/SET domain 6.
    
   0.862
smc3
Structural maintenance of chromosomes protein.
     
 0.806
LOC113029849
REC8 meiotic recombination protein b.
     
 0.799
ENSACLP00000030315
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.788
ENSACLP00000003169
HAUS augmin-like complex, subunit 1.
    
   0.720
meiob
Methionine sulfoxide reductase B1b.
      
 0.703
terb2
Telomere repeat binding bouquet formation protein 2.
      
 0.696
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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