Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113027371Potassium channel, subfamily V, member 2a; Belongs to the potassium channel family. (530 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.895
LOC113020676
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.727
LOC113034184
Uncharacterized protein.
    
 
 0.679
ENSACLP00000028867
Uncharacterized protein.
    
 
 0.679
s100z
Protein S100; Belongs to the S-100 family.
    
 
 0.674
LOC113019942
RING-type domain-containing protein.
    
 
 0.672
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
  
 0.670
ENSACLP00000028272
Nipped-B protein.
      
 0.668
rpl34
Ribosomal protein L34.
  
 0.666
LOC113034084
Sushi domain containing 1.
    
 
 0.664
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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