Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020894Zinc finger protein 207. (461 aa)    
Predicted Functional Partners:
ENSACLP00000006066
BUB3 mitotic checkpoint protein.
   
 
 0.958
ENSACLP00000030503
Heterogeneous nuclear ribonucleoprotein M.
   
   0.931
sf3a2
Splicing factor 3a, subunit 2.
   
 
 0.894
WDR77
WD repeat domain 77.
    
 
 0.810
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
    
 
 0.770
ENSACLP00000018067
BUB1 N-terminal domain-containing protein.
    
 
 0.770
ENSACLP00000018094
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.770
ubr5
Ubiquitin protein ligase E3 component n-recognin 5.
   
 
 0.769
sf3b1
Splicing factor 3b, subunit 1.
   
   0.738
SRSF10
Serine and arginine rich splicing factor 10.
   
 
 0.721
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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