Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113034425Gamma-aminobutyric acid (GABA) A receptor, pi; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (448 aa)    
Predicted Functional Partners:
ENSACLP00000040283
Trafficking protein, kinesin binding 2.
    
  0.878
gphn
Gephyrin b.
     
 0.877
LOC113021414
N-ethylmaleimide-sensitive factor a.
     
  0.841
LOC113028093
N-ethylmaleimide-sensitive factor b.
     
  0.841
anapc5
Anaphase promoting complex subunit 5.
   
 
  0.826
anapc7
Anaphase promoting complex subunit 7.
     
  0.822
anapc15
Anaphase promoting complex subunit 15.
     
  0.822
ENSACLP00000015199
APC11 anaphase promoting complex subunit 11 homolog (yeast).
     
  0.822
anapc13
Anaphase promoting complex subunit 13.
     
  0.822
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
     
  0.822
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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