Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113019175Uncharacterized protein. (1223 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.671
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.576
LOC113031482
Fatty acid binding protein 10a, liver basic.
      
 0.473
ENSACLP00000015120
Bicaudal C homolog 2.
      
 0.464
bicc1
BicC family RNA binding protein 1a.
      
 0.464
ENSACLP00000010461
Protein kinase domain-containing protein.
    
 
 0.447
LOC113012402
Phospholipid phosphatase related 3a.
  
 
  0.446
ENSACLP00000001792
Lin-52 DREAM MuvB core complex component.
    
 0.438
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.435
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.416
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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