STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001377Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (154 aa)    
Predicted Functional Partners:
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.892
ENSACLP00000025715
ANK_REP_REGION domain-containing protein.
    
 0.814
ENSACLP00000025784
Uncharacterized protein.
    
 0.814
LOC113026025
Euchromatic histone-lysine N-methyltransferase 1b.
    
 0.814
l3mbtl2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.803
ENSACLP00000008291
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.778
LOC113027786
Mbt domain containing 1.
    
 0.774
LOC113020128
FCS-type domain-containing protein.
    
 0.774
emsy
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.758
pcgf6
Polycomb group ring finger 6.
    
 0.742
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.