STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008915Prickle homolog 1b. (944 aa)    
Predicted Functional Partners:
VANGL1
Vang-like protein.
    
 0.965
ENSACLP00000003757
Vang-like protein.
    
 0.961
VANGL2
Vang-like protein.
    
 0.961
dvl2
Dishevelled segment polarity protein 2.
    
 0.945
dvl3
Dishevelled segment polarity protein 3a.
    
 0.932
rnpepl1
Arginyl aminopeptidase like 1.
    
 0.931
LOC113008135
Vang-like protein.
    
 0.909
PRICKLE1
Prickle homolog 1a.
  
  
 
0.818
ankrd6
Ankyrin repeat domain 6b.
    
 0.737
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
  0.684
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.