Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001381Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.623
ENSACLP00000011894
GRB2 related adaptor protein 2b.
   
 0.572
LOC113020258
Uncharacterized protein.
   
 0.572
LOC113020262
GRB2 related adaptor protein 2a.
   
 0.572
LOC113007074
Uncharacterized protein.
    
 0.545
FMN2
Formin 2.
    
 0.542
ENSACLP00000028908
FH2 domain-containing protein.
    
 0.542
ENSACLP00000016464
Tyrosine-protein kinase.
   
 0.538
syk
Tyrosine-protein kinase.
   
 0.538
FMN1
Formin 1.
    
 0.535
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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