STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023918Tudor domain containing 7 a. (1107 aa)    
Predicted Functional Partners:
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.746
ENSACLP00000007575
Piwi domain-containing protein.
   
 0.680
ENSACLP00000007576
Piwi domain-containing protein.
   
 0.680
ENSACLP00000008510
Uncharacterized protein; Belongs to the argonaute family.
   
 0.680
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.680
ALPK1
Alpha kinase 1.
   
    0.675
ENSACLP00000030882
Tudor domain containing 9.
  
 0.632
LOC113030490
Uncharacterized protein.
    
   0.591
ENSACLP00000008878
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
    
 0.581
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
  
 
  0.578
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.