STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113021262Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix. Required during erythropoiesis. Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (330 aa)    
Predicted Functional Partners:
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit b.
    
 
 0.785
ccdc105
Coiled-coil domain containing 105.
      
 0.660
ENSACLP00000007618
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.655
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
      
 0.653
uros
Uroporphyrinogen III synthase.
   
  
 0.635
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.604
LOC113018886
Solute carrier family 7 member 8a.
      
 0.603
zc3h14
Zinc finger CCCH-type containing 14.
    
 
 0.578
LOC113028226
Threonine aldolase 1.
    
 
 0.575
LOC113037196
Glutaredoxin 5 homolog (S. cerevisiae).
      
 0.551
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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