Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sytl4Synaptotagmin-like 4. (717 aa)    
Predicted Functional Partners:
rab27b
RAB27B, member RAS oncogene family.
    
 0.820
rab27a
RAB27A, member RAS oncogene family.
    
 0.820
ENSACLP00000030245
Uncharacterized protein.
    
 0.820
LOC113020580
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.731
LOC113024828
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.610
LOC113025913
t-SNARE coiled-coil homology domain-containing protein.
    
 0.610
LOC113033523
Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.609
stxbp1
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.609
LOC113034107
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.607
LOC113020138
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.607
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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