STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
il16Uncharacterized protein. (614 aa)    
Predicted Functional Partners:
ENSACLP00000037142
Uncharacterized protein.
   
 0.952
LOC113031707
Uncharacterized protein.
  
 
 
0.887
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.731
ENSACLP00000009928
TNF receptor-associated factor 3 interacting protein 1.
    
 0.713
ENSACLP00000003423
Intraflagellar transport 172.
    
 0.702
ENSACLP00000022257
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.700
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.694
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.694
LOC113022066
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
0.680
ENSACLP00000019443
Uncharacterized protein.
    
 0.680
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.