LOC113015699 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC113015699

Guanine nucleotide binding protein (G protein), alpha 11a (Gq class). (359 aa)

Predicted Functional Partners:

LOC113008369

0.934

CCKAR

0.934

LOC113016497

0.932

tbxa2r

0.922

PLCB4

0.907

PLCB2

0.901

plcb3

0.901

LOC113019096

0.893

htr2b

0.893

agtr1

0.893

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCKAR	LOC113008369	ENSACLP00000013076	ENSACLP00000006165	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.851
CCKAR	LOC113015699	ENSACLP00000013076	ENSACLP00000001431	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.934
CCKAR	LOC113016497	ENSACLP00000013076	ENSACLP00000040173	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	Si:dkey-1h24.2; Belongs to the G-protein coupled receptor 1 family.	0.851
CCKAR	LOC113019096	ENSACLP00000013076	ENSACLP00000032558	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.	0.505
CCKAR	htr2b	ENSACLP00000013076	ENSACLP00000039674	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.	0.499
LOC113008369	CCKAR	ENSACLP00000006165	ENSACLP00000013076	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	0.851
LOC113008369	LOC113015699	ENSACLP00000006165	ENSACLP00000001431	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.934
LOC113008369	LOC113016497	ENSACLP00000006165	ENSACLP00000040173	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Si:dkey-1h24.2; Belongs to the G-protein coupled receptor 1 family.	0.849
LOC113008369	LOC113019096	ENSACLP00000006165	ENSACLP00000032558	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.	0.505
LOC113008369	htr2b	ENSACLP00000006165	ENSACLP00000039674	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.	0.499
LOC113015699	CCKAR	ENSACLP00000001431	ENSACLP00000013076	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.	0.934
LOC113015699	LOC113008369	ENSACLP00000001431	ENSACLP00000006165	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.934
LOC113015699	LOC113016497	ENSACLP00000001431	ENSACLP00000040173	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Si:dkey-1h24.2; Belongs to the G-protein coupled receptor 1 family.	0.932
LOC113015699	LOC113019096	ENSACLP00000001431	ENSACLP00000032558	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.	0.893
LOC113015699	PLCB2	ENSACLP00000001431	ENSACLP00000005165	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.901
LOC113015699	PLCB4	ENSACLP00000001431	ENSACLP00000039049	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.907
LOC113015699	agtr1	ENSACLP00000001431	ENSACLP00000040657	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.893
LOC113015699	htr2b	ENSACLP00000001431	ENSACLP00000039674	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.	0.893
LOC113015699	plcb3	ENSACLP00000001431	ENSACLP00000032069	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.901
LOC113015699	tbxa2r	ENSACLP00000001431	ENSACLP00000037809	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Thromboxane A2 receptor.	0.922