SLC39A12 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SLC39A12

Solute carrier family 39 member 12. (689 aa)

Predicted Functional Partners:

SLC39A11

0.929

SLC39A1

0.920

SLC39A3

0.913

LOC113019556

0.913

ENSACLP00000025245

0.897

LOC113035298

0.896

slc39a9

0.896

LOC113022632

0.879

LOC113012914

0.879

slc39a10

0.854

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000025245	LOC113012914	ENSACLP00000025245	ENSACLP00000023662	Uncharacterized protein.	Uncharacterized protein.	0.852
ENSACLP00000025245	LOC113019556	ENSACLP00000025245	ENSACLP00000024135	Uncharacterized protein.	Solute carrier family 39 member 1.	0.933
ENSACLP00000025245	LOC113022632	ENSACLP00000025245	ENSACLP00000006636	Uncharacterized protein.	Solute carrier family 11 member 2.	0.852
ENSACLP00000025245	LOC113035298	ENSACLP00000025245	ENSACLP00000038101	Uncharacterized protein.	Uncharacterized protein.	0.938
ENSACLP00000025245	SLC39A1	ENSACLP00000025245	ENSACLP00000022443	Uncharacterized protein.	Solute carrier family 39 member 1.	0.946
ENSACLP00000025245	SLC39A11	ENSACLP00000025245	ENSACLP00000031104	Uncharacterized protein.	Solute carrier family 39 member 11.	0.828
ENSACLP00000025245	SLC39A12	ENSACLP00000025245	ENSACLP00000001441	Uncharacterized protein.	Solute carrier family 39 member 12.	0.897
ENSACLP00000025245	SLC39A3	ENSACLP00000025245	ENSACLP00000003408	Uncharacterized protein.	Solute carrier family 39 member 3.	0.933
ENSACLP00000025245	slc39a10	ENSACLP00000025245	ENSACLP00000006892	Uncharacterized protein.	Uncharacterized protein.	0.876
ENSACLP00000025245	slc39a9	ENSACLP00000025245	ENSACLP00000040833	Uncharacterized protein.	Solute carrier family 39 member 9.	0.965
LOC113012914	ENSACLP00000025245	ENSACLP00000023662	ENSACLP00000025245	Uncharacterized protein.	Uncharacterized protein.	0.852
LOC113012914	LOC113019556	ENSACLP00000023662	ENSACLP00000024135	Uncharacterized protein.	Solute carrier family 39 member 1.	0.866
LOC113012914	LOC113035298	ENSACLP00000023662	ENSACLP00000038101	Uncharacterized protein.	Uncharacterized protein.	0.843
LOC113012914	SLC39A1	ENSACLP00000023662	ENSACLP00000022443	Uncharacterized protein.	Solute carrier family 39 member 1.	0.866
LOC113012914	SLC39A11	ENSACLP00000023662	ENSACLP00000031104	Uncharacterized protein.	Solute carrier family 39 member 11.	0.876
LOC113012914	SLC39A12	ENSACLP00000023662	ENSACLP00000001441	Uncharacterized protein.	Solute carrier family 39 member 12.	0.879
LOC113012914	SLC39A3	ENSACLP00000023662	ENSACLP00000003408	Uncharacterized protein.	Solute carrier family 39 member 3.	0.866
LOC113012914	slc39a10	ENSACLP00000023662	ENSACLP00000006892	Uncharacterized protein.	Uncharacterized protein.	0.873
LOC113012914	slc39a9	ENSACLP00000023662	ENSACLP00000040833	Uncharacterized protein.	Solute carrier family 39 member 9.	0.843
LOC113019556	ENSACLP00000025245	ENSACLP00000024135	ENSACLP00000025245	Solute carrier family 39 member 1.	Uncharacterized protein.	0.933