STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001445RRM domain-containing protein. (372 aa)    
Predicted Functional Partners:
ENSACLP00000030503
Heterogeneous nuclear ribonucleoprotein M.
   
 0.967
LOC113025582
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.950
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.950
rbmx
RNA binding motif protein X-linked.
   
 0.912
LOC113023476
Uncharacterized protein.
   
 
0.908
LOC113013145
Uncharacterized protein.
   
 0.901
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.901
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.889
ENSACLP00000025221
Interleukin enhancer binding factor 2.
   
 
 0.883
ENSACLP00000015959
RRM domain-containing protein.
   
 0.868
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.