Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSACLP00000001445RRM domain-containing protein. (372 aa)    
Predicted Functional Partners:
ENSACLP00000030503
Heterogeneous nuclear ribonucleoprotein M.
   
 0.983
LOC113025582
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.978
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.978
rbmx
RNA binding motif protein X-linked.
   
 0.974
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.954
LOC113013145
Uncharacterized protein.
   
 0.952
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.952
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.944
ENSACLP00000025221
Interleukin enhancer binding factor 2.
   
 
 0.935
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.933
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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