Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc93aUnc-93 homolog A. (464 aa)    
Predicted Functional Partners:
ENSACLP00000013582
Uncharacterized protein.
   
 
 0.954
slc35e4
Solute carrier family 35 member E4.
    
 
 0.813
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.715
svopl
SVOP-like.
      
 0.704
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.678
ENSACLP00000020358
Major facilitator superfamily domain containing 6a.
      
 0.665
sord
Sorbitol dehydrogenase.
      
 0.664
mfsd5
Major facilitator superfamily domain containing 5.
   
  
 0.659
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.659
LOC113034546
Glutathione S-transferase.
      
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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