STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023922Kazal-like domain-containing protein. (80 aa)    
Predicted Functional Partners:
LOC113024172
Fibrinogen C-terminal domain-containing protein.
   
  
 0.663
pla2g1b
Phospholipase A(2).
   
  
 0.662
ENSACLP00000038956
Phospholipase A(2).
   
  
 0.662
LOC113007032
T cell activation RhoGTPase activating protein.
      
 0.659
ENSACLP00000002299
Transmembrane serine protease 15; Belongs to the peptidase S1 family.
    
 0.607
ENSACLP00000019390
Uncharacterized protein.
      
 0.570
ENSACLP00000008975
Si:ch73-288o11.4.
      
 0.563
LOC113021648
Uncharacterized protein.
   
  
 0.548
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
      
 0.515
ENSACLP00000015189
WD_REPEATS_REGION domain-containing protein.
      
 0.515
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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