Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfap44Uncharacterized protein. (1779 aa)    
Predicted Functional Partners:
WDR63
WD repeat domain 63.
  
 
 0.955
ENSACLP00000003705
Uncharacterized protein.
   
 
 0.954
ENSACLP00000017542
Uncharacterized protein.
   
 
 0.948
ak9
Adenylate kinase 9.
  
 0.944
ccdc113
DUF4201 domain-containing protein.
    
 
 0.942
wdr66
WD repeat domain 66.
   
 0.935
CFAP61
Cilia and flagella associated protein 61.
  
 
 0.934
ccdc96
Coiled-coil domain containing 96.
    
 0.926
maats1
MYCBP-associated, testis expressed 1.
   
 0.923
dnali1
Dynein, axonemal, light intermediate chain 1.
    
 
 0.921
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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