STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rap1gapRAP1 GTPase activating protein. (780 aa)    
Predicted Functional Partners:
LOC113008802
Uncharacterized protein.
    
 0.899
LOC113021951
Uncharacterized protein.
    
 0.899
LOC113006695
DIRAS family GTPase 1.
    
 0.765
RAP2A
RAP2A, member of RAS oncogene family.
    
 0.765
LOC113012107
DIRAS family, GTP-binding RAS-like 1b.
    
 0.765
LOC113007449
RAP2C, member of RAS oncogene family.
    
 0.765
LOC113012815
Rap guanine nucleotide exchange factor (GEF) 3.
   
 0.660
LOC113011053
Zgc:171558.
   
 0.655
rapgef4
Rap guanine nucleotide exchange factor (GEF) 4.
   
 0.655
LOC113029257
V-ral simian leukemia viral oncogene homolog Aa (ras related).
    
 0.654
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.