STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001480DM domain-containing protein. (233 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.843
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.840
ENSACLP00000034458
Uncharacterized protein.
    
 0.821
wdr59
WD repeat domain 59.
    
 0.819
ENSACLP00000017518
WD repeat domain 24.
    
 0.818
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.812
immp1l
Mitochondrial inner membrane protease subunit.
    
 0.720
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.720
grp
Uncharacterized protein.
    
 0.622
sec11a
Signal peptidase complex catalytic subunit SEC11.
    
 0.622
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.