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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001482Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (390 aa)    
Predicted Functional Partners:
GOLGA7
Golgin A7.
    
 0.801
ENSACLP00000015854
Golgin A7.
    
 0.801
LOC113035259
Golgin A7 family member B.
    
 0.726
GOLGA7B
Golgin A7 family, member Ba.
    
 0.726
ENSACLP00000021335
Protection of telomeres 1 homolog.
    
 0.656
ENSACLP00000001223
Uncharacterized protein.
    
 0.595
nbn
Nibrin.
    
  0.510
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.487
tmem254
Uncharacterized protein.
     
 0.484
blvrb
Biliverdin reductase B.
     
 0.484
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.