STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001494SAM and SH3 domain containing 3. (389 aa)    
Predicted Functional Partners:
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
   
 
 0.707
pik3cg
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma; Belongs to the PI3/PI4-kinase family.
   
 
  0.585
LOC113013785
Si:rp71-17i16.5; Belongs to the PI3/PI4-kinase family.
   
 
  0.585
LOC113033441
Uncharacterized protein.
    
  0.578
ENSACLP00000011022
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
    
  0.578
LOC113010606
Phosphoinositide-3-kinase, regulatory subunit 3a (gamma).
    
  0.578
LOC113009053
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
    
  0.578
ENSACLP00000034020
Uncharacterized protein.
    
  0.578
pik3r1
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
  0.578
LOC113021109
Uncharacterized protein.
   
 
  0.563
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.