STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001494SAM and SH3 domain containing 3. (389 aa)    
Predicted Functional Partners:
RNF207
Ring finger protein 207a.
      
 0.634
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
   
 
 0.628
snx20
Sorting nexin 20.
   
  
 0.559
LOC113007032
T cell activation RhoGTPase activating protein.
   
  
 0.531
LOC113033441
Uncharacterized protein.
    
  0.511
ENSACLP00000011022
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
    
  0.511
LOC113010606
Phosphoinositide-3-kinase, regulatory subunit 3a (gamma).
    
  0.511
LOC113009053
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
    
  0.511
ENSACLP00000034020
Uncharacterized protein.
    
  0.511
inpp5d
Inositol polyphosphate-5-phosphatase D.
   
 
 0.511
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (20%) [HD]