ENSACLP00000001498 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000001498

G_PROTEIN_RECEP_F1_2 domain-containing protein. (335 aa)

Predicted Functional Partners:

LOC113022538

0.846

LOC113036379

0.827

LOC113022754

0.650

ppp4r1

0.599

ENSACLP00000008297

0.546

LOC113013061

0.542

LOC113023276

0.542

gnai2

0.542

ENSACLP00000020083

0.542

LOC113008934

0.542

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001498	ENSACLP00000008297	ENSACLP00000001498	ENSACLP00000008297	G_PROTEIN_RECEP_F1_2 domain-containing protein.	DUF4062 domain-containing protein.	0.546
ENSACLP00000001498	ENSACLP00000020083	ENSACLP00000001498	ENSACLP00000020083	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.542
ENSACLP00000001498	LOC113008934	ENSACLP00000001498	ENSACLP00000028457	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.542
ENSACLP00000001498	LOC113013061	ENSACLP00000001498	ENSACLP00000001885	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.542
ENSACLP00000001498	LOC113022538	ENSACLP00000001498	ENSACLP00000036614	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.846
ENSACLP00000001498	LOC113022754	ENSACLP00000001498	ENSACLP00000016423	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Tankyrase_bdg_C domain-containing protein.	0.650
ENSACLP00000001498	LOC113023276	ENSACLP00000001498	ENSACLP00000006600	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	0.542
ENSACLP00000001498	LOC113036379	ENSACLP00000001498	ENSACLP00000015908	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Somatostatin.	0.827
ENSACLP00000001498	gnai2	ENSACLP00000001498	ENSACLP00000018838	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.542
ENSACLP00000001498	ppp4r1	ENSACLP00000001498	ENSACLP00000031577	G_PROTEIN_RECEP_F1_2 domain-containing protein.	WRNPLPNID domain-containing protein.	0.599
ENSACLP00000008297	ENSACLP00000001498	ENSACLP00000008297	ENSACLP00000001498	DUF4062 domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.546
ENSACLP00000020083	ENSACLP00000001498	ENSACLP00000020083	ENSACLP00000001498	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.542
ENSACLP00000020083	LOC113022754	ENSACLP00000020083	ENSACLP00000016423	Uncharacterized protein.	Tankyrase_bdg_C domain-containing protein.	0.439
LOC113008934	ENSACLP00000001498	ENSACLP00000028457	ENSACLP00000001498	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.542
LOC113008934	LOC113013061	ENSACLP00000028457	ENSACLP00000001885	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.683
LOC113008934	LOC113022754	ENSACLP00000028457	ENSACLP00000016423	Uncharacterized protein.	Tankyrase_bdg_C domain-containing protein.	0.439
LOC113008934	gnai2	ENSACLP00000028457	ENSACLP00000018838	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.487
LOC113013061	ENSACLP00000001498	ENSACLP00000001885	ENSACLP00000001498	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.542
LOC113013061	LOC113008934	ENSACLP00000001885	ENSACLP00000028457	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Uncharacterized protein.	0.683
LOC113013061	LOC113022754	ENSACLP00000001885	ENSACLP00000016423	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Tankyrase_bdg_C domain-containing protein.	0.439