STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM236Transmembrane protein 236. (388 aa)    
Predicted Functional Partners:
iqsec3
IQ motif and Sec7 domain 3a.
      
 0.655
ENSACLP00000000583
Immunoglobulin superfamily, member 5a.
      
 0.651
ENSACLP00000006078
Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.650
caln1
Calneuron 1.
      
 0.650
shbg
LAM_G_DOMAIN domain-containing protein.
    
   0.621
zfyve26
Zinc finger, FYVE domain containing 26.
      
 0.610
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
      
 0.605
LOC113013152
Nuclear receptor subfamily 1, group H, member 5.
      
 0.560
ENSACLP00000022257
Intraflagellar transport 80 homolog (Chlamydomonas).
      
 0.558
ccdc158
Uncharacterized protein.
      
 0.550
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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