STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001504Solute carrier family 22 member 18. (422 aa)    
Predicted Functional Partners:
phlda2
Pleckstrin homology-like domain, family A, member 2.
      
 0.559
ENSACLP00000004076
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.533
ENSACLP00000037354
Solute carrier family 22 member 31.
      
 0.514
slc22a16
Solute carrier family 22 member 16.
   
  
 0.501
LOC113027059
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.497
ENSACLP00000015406
Uncharacterized protein.
      
 0.495
DLK1
Delta like non-canonical Notch ligand 1.
      
 0.452
LOC113013820
Necdin-like 2.
      
 0.451
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.414
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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