STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001526Ig-like domain-containing protein. (193 aa)    
Predicted Functional Partners:
ENSACLP00000001820
Uncharacterized protein.
 
     0.925
LOC113036802
Zgc:112083.
      
 0.601
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.549
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.536
LOC113008897
DENN/MADD domain containing 6B.
      
 0.504
ENSACLP00000003216
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
    
  0.476
ENSACLP00000003225
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
    
  0.476
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
    
  0.476
ENSACLP00000012038
Uncharacterized protein.
    
  0.476
LOC113030223
Uncharacterized protein.
    
  0.476
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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