STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113006719Vitellogenin 3, phosvitinless. (1267 aa)    
Predicted Functional Partners:
mttp
Microsomal triglyceride transfer protein.
   
 0.878
LOC113014972
Apolipoprotein A-IV a.
   
 0.821
LOC113032020
Uncharacterized protein.
   
 0.821
LOC113032148
Uncharacterized protein.
   
 0.821
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.801
ENSACLP00000034959
Uncharacterized protein.
    
 0.801
ENSACLP00000028417
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
   
  
 0.739
LOC113014966
Apolipoprotein Ea.
   
 0.704
ENSACLP00000027937
Cell death inducing DFFA like effector c.
   
 
 0.690
ENSACLP00000016344
Uncharacterized protein.
   
 0.688
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (28%) [HD]