Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2CD4CC2 calcium dependent domain containing 4C. (418 aa)    
Predicted Functional Partners:
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
    
 
 0.621
LOC113031405
Cytochrome b5 reductase 4.
   
 
 0.609
ENSACLP00000016856
Importin 13.
      
 0.606
kbtbd2
Kelch repeat and BTB (POZ) domain containing 2.
      
 0.606
gatad2b
GATA zinc finger domain containing 2B.
      
 0.605
ENSACLP00000005550
ATP-binding cassette, sub-family C (CFTR/MRP), member 8.
    
 0.581
ENSACLP00000021185
Phosphoinositide-3-kinase, regulatory subunit 4.
   
  
 0.527
ENSACLP00000008539
Uncharacterized protein.
     
 0.524
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.524
ENSACLP00000012866
Uncharacterized protein.
     
 0.516
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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