Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLUL1Clusterin; Belongs to the clusterin family. (465 aa)    
Predicted Functional Partners:
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.740
ENSACLP00000041064
Apolipoprotein Eb.
   
  
 0.644
LOC113007350
Amyloid beta (A4) precursor protein b.
    
 0.598
APP
Amyloid beta precursor protein.
    
 0.598
nudcd1
NudC domain containing 1.
    
   0.593
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.537
LOC113030105
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
   
 0.511
LOC113009037
Ceruloplasmin; Belongs to the multicopper oxidase family.
   
 0.511
LOC113031147
Vitronectin b.
    
 
 0.503
LOC113036098
Vitronectin a.
    
 
 0.503
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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