STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001596Actin binding LIM protein family, member 3. (688 aa)    
Predicted Functional Partners:
LOC113022989
Cell division cycle 42.
     
 0.833
ENSACLP00000009243
HP domain-containing protein.
     
0.669
ENSACLP00000015725
Dematin actin binding protein.
     
0.669
ENSACLP00000032945
Actin binding LIM protein 1a.
     
0.669
LOC113033420
Adducin 2 (beta).
   
 0.552
add1
Adducin 1 (alpha).
   
 0.552
LOC113034824
Adducin 3 (gamma) b.
   
 0.552
LOC113023887
Adducin 3 (gamma) a.
   
 0.552
LOC113015068
Cell division cycle 42, like.
     
 0.536
ENSACLP00000023060
Cell division cycle 42, like.
     
 0.536
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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