STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113031942Uncharacterized protein. (90 aa)    
Predicted Functional Partners:
ENSACLP00000034495
Uncharacterized protein.
  
  
0.573
ENSACLP00000034678
annotation not available
  
  
0.573
ENSACLP00000035047
Uncharacterized protein.
  
  
0.573
LOC113027365
Uncharacterized protein.
  
  
0.573
LOC113032603
Uncharacterized protein.
  
  
 
0.551
LOC113032605
Uncharacterized protein.
  
  
 
0.551
LOC113032194
Uncharacterized protein.
  
  
 
0.550
LOC113032212
Uncharacterized protein.
  
  
 
0.550
LOC113032318
Uncharacterized protein.
  
  
 
0.550
LOC113031943
BHLH domain-containing protein.
     
 0.534
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.