LOC113031942 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

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[Homology]

Score

LOC113031942

Uncharacterized protein. (90 aa)

Predicted Functional Partners:

slc40a1

0.933

ENSACLP00000003549

0.906

LOC113032604

0.859

ENSACLP00000034495

0.803

ENSACLP00000034678

0.803

ENSACLP00000035047

0.803

LOC113027365

0.803

LOC113032194

0.788

LOC113032212

0.788

LOC113032318

0.788

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000003549	ENSACLP00000034495	ENSACLP00000003549	ENSACLP00000034495	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.787
ENSACLP00000003549	ENSACLP00000034678	ENSACLP00000003549	ENSACLP00000034678	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	annotation not available	0.787
ENSACLP00000003549	ENSACLP00000035047	ENSACLP00000003549	ENSACLP00000035047	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.787
ENSACLP00000003549	LOC113027365	ENSACLP00000003549	ENSACLP00000041119	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.787
ENSACLP00000003549	LOC113031942	ENSACLP00000003549	ENSACLP00000001599	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.906
ENSACLP00000003549	LOC113032194	ENSACLP00000003549	ENSACLP00000034476	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.787
ENSACLP00000003549	LOC113032212	ENSACLP00000003549	ENSACLP00000034505	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.787
ENSACLP00000003549	LOC113032318	ENSACLP00000003549	ENSACLP00000035031	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.787
ENSACLP00000003549	LOC113032604	ENSACLP00000003549	ENSACLP00000035128	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.859
ENSACLP00000003549	slc40a1	ENSACLP00000003549	ENSACLP00000003057	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.872
ENSACLP00000034495	ENSACLP00000003549	ENSACLP00000034495	ENSACLP00000003549	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787
ENSACLP00000034495	LOC113031942	ENSACLP00000034495	ENSACLP00000001599	Uncharacterized protein.	Uncharacterized protein.	0.803
ENSACLP00000034495	slc40a1	ENSACLP00000034495	ENSACLP00000003057	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787
ENSACLP00000034678	ENSACLP00000003549	ENSACLP00000034678	ENSACLP00000003549	annotation not available	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787
ENSACLP00000034678	LOC113031942	ENSACLP00000034678	ENSACLP00000001599	annotation not available	Uncharacterized protein.	0.803
ENSACLP00000034678	slc40a1	ENSACLP00000034678	ENSACLP00000003057	annotation not available	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787
ENSACLP00000035047	ENSACLP00000003549	ENSACLP00000035047	ENSACLP00000003549	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787
ENSACLP00000035047	LOC113031942	ENSACLP00000035047	ENSACLP00000001599	Uncharacterized protein.	Uncharacterized protein.	0.803
ENSACLP00000035047	slc40a1	ENSACLP00000035047	ENSACLP00000003057	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787
LOC113027365	ENSACLP00000003549	ENSACLP00000041119	ENSACLP00000003549	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.787