STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113018643Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family. (469 aa)    
Predicted Functional Partners:
ENSACLP00000001054
Glucosidase, alpha; neutral C; Belongs to the glycosyl hydrolase 31 family.
  
 0.879
LOC113024521
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
  
 0.872
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
  
 0.870
ENSACLP00000006797
P-type domain-containing protein.
  
 0.862
ENSACLP00000010207
P-type domain-containing protein.
  
 0.862
ENSACLP00000029955
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.859
fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.825
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
  
 0.777
ENSACLP00000008732
Fibroblast growth factor 21.
    
 0.743
LOC113030553
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
    
 0.741
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.