STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex10Peroxisomal biogenesis factor 10. (322 aa)    
Predicted Functional Partners:
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.999
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.988
LOC113016539
Sterol carrier protein 2b.
     
 0.988
ENSACLP00000024264
Enoyl-CoA delta isomerase 2.
     
 0.986
hsdl2
Hydroxysteroid dehydrogenase like 2.
     
 0.985
zfand4
Zinc finger, AN1-type domain 4.
    
 0.983
pex2
Peroxisomal biogenesis factor 2.
   
 0.978
pex14
Peroxisomal biogenesis factor 14.
    
 0.959
pex19
Peroxisomal biogenesis factor 19.
    
 
 0.956
ENSACLP00000019301
Uncharacterized protein.
    
 0.951
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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